BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G08SP1|AL427670
(810 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1787 1490 0.0
>3x_Contig1787
Length = 34189
Score = 1490 bits (741), Expect = 0.0
Identities = 788/811 (97%), Gaps = 3/811 (0%)
Strand = Plus / Plus
Query: 1 tcggtgaatcwgcacgtttcattagagaaatgtttgcatacgccaaagaacatgaacctt 60
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24768 tcggtgaatcagcacgtatcattagagaaatgtttgcatacgccaaagaacatgaacctt 24827
Query: 61 gtwtcatctttatggacgaaatagatgctatcggtggacgtagatttagcgaaggtacct 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24828 gtatcatctttatggacgaaatagatgctatcggtggacgtagatttagcgaaggtacct 24887
Query: 121 cagcwgatcgtgaaattcaacgtacattgatggwactattaactcagatggatggtttcg 180
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 24888 cagcagatcgtgaaattcaacgtacattgatggaactattaactcagatggatggtttcg 24947
Query: 181 acaacttaggacaaacgaaagtyattatggctacgaattagacctgacactttagatcct 240
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 24948 acaacttaggacaaacgaaagttattatggctacgaat-agacctgacactttagatcct 25006
Query: 241 gctttactaagacctggtagattggacagaaaaatcgamatcagtttaccaaatgaggca 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 25007 gctttactaagacctggtagattggacagaaaaatcgaaatcagtttaccaaatgaggca 25066
Query: 301 ggaagattagaaatcttcaagattcatacatccaatgtaaaammagctggagaatttgac 360
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 25067 ggaagattagaaatcttcaagattcatacatccaatgtaaaaaaagctggagaatttgac 25126
Query: 361 tttgaagctgcagtcaagatgagtgatggatttaacggtgcggatatccgtmactgtata 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 25127 tttgaagctgcagtcaagatgagtgatggatttaacggtgcggatatccgtaactgtata 25186
Query: 421 actgamgcagggttcttcgctatcagggacgaccgcgattatataamccaggaagatcta 480
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 25187 actgaagcagggttcttcgctatcagggacgaccgcgattatataaaccaggaagatcta 25246
Query: 481 tatgacagccgtgagacaggttgccgaagtcaagaagctcgaaggcmagcttgaatatca 540
|||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 25247 -atgaaagccgtgagaaaggttgccgaagtcaagaagctcgaaggcaagcttgaatatca 25305
Query: 541 ammgttgtaatgaatatacacacttgtttaggcatctcaagtagattcataattttaaga 600
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25306 aaagttgtaatgaatatacacacttgtttaggcatctcaagtagattcataattttaaga 25365
Query: 601 ttaaaaaccaaccactatagtataagcgctaaaattgttgccgtaattatkawtcattag 660
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 25366 ttaaaaaccaaccactatagtataagcgctaaaattgttgccgtaattatgaatcattag 25425
Query: 661 taaatctattaaacgatgaaatagccctatctgcagttattaaacctttttttgacacga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25426 taaatctattaaacgatgaaatagccctatctgcagttattaaacctttttttgacacga 25485
Query: 721 aacgcatattaaactcatctgctagatgctccttaagctttgcaaaccgattcttgaagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25486 aacgcatattaaactcatctgctagatgctccttaagctttgcaaaccgattcttgaagt 25545
Query: 781 tagtgg-amaataggggcatatcatctcaaa 810
|||||| | ||||||||||||||||||||||
Sbjct: 25546 tagtggaacaataggggcatatcatctcaaa 25576
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4289
Number of Sequences: 1807
Number of extensions: 4289
Number of successful extensions: 95
Number of sequences better than 1.0e-20: 1
length of query: 810
length of database: 10,358,551
effective HSP length: 16
effective length of query: 794
effective length of database: 10,329,639
effective search space: 8201733366
effective search space used: 8201733366
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)